Insertion junction: LMJ.RY0402.163671_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.163671
Chromosome:chromosome 8
Location:2349934
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g370750 (1 of 1) IPR021934 - Sox C-terminal transactivation domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGGCGCGAGCAGGAACGGCCACCAGG
Internal bar code:TCGGGGGAAAATGTACGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:87.5622
LEAP-Seq n confirming:352
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTCAAAGCTACCAGCCG
Suggested primer 2:CAAGGGAAGCAAGTAGCTGG