Insertion junction: LMJ.RY0402.163833_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.163833
Chromosome:chromosome 17
Location:5834397
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGGTGCGTGGCCGCCACCTGGTCAAGC
Internal bar code:TGTTTAATGAGTCGGACCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:607
LEAP-Seq percent confirming:92.271
LEAP-Seq n confirming:967
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATAATTTGGCGTGGATT
Suggested primer 2:CAAATCTGCTTGCAGGTGAA