Insertion junction: LMJ.RY0402.163899_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.163899
Chromosome:chromosome 10
Location:2145734
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g433550 DNL4,LIG4,LIG2 (1 of 21) IPR001357 - BRCT domain; DNA ligase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAGTCGAGCTCACCTATAGGCAAAGGTA
Internal bar code:CGGGGTGTCCCGACTATACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:20.1279
LEAP-Seq n confirming:2675
LEAP-Seq n nonconfirming:10615
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGAGATAGGGGACACG
Suggested primer 2:TTTGAGTTCTCGAACCACCC