Insertion junction: LMJ.RY0402.164138_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.164138
Chromosome:chromosome 5
Location:1418403
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g244200 TMA1,COTH2 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGCGCGTCAGCAACGATGCAGCAACT
Internal bar code:AATTAACCAGGGATAGGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:787
LEAP-Seq percent confirming:83.5628
LEAP-Seq n confirming:2064
LEAP-Seq n nonconfirming:406
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACCGTATGGTTTGCGA
Suggested primer 2:ATATAGTCGCGCCAGTTGCT