Insertion junction: LMJ.RY0402.164336_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164336
Chromosome:chromosome 1
Location:6818337
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g049132 (1 of 1) PTHR23097//PTHR23097:SF105 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATCTCCTGACACCCGCAGCTGTAGCAC
Internal bar code:GCCAGGACCTACGGCTGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:993
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCGATACATCTCGGCAT
Suggested primer 2:GAGAGCACACCTTGCATTGA