Insertion junction: LMJ.RY0402.164416_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164416
Chromosome:chromosome 11
Location:1620781
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467766 (1 of 1) 6.5.1.3 - RNA ligase (ATP) / Ribonucleic ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCGAACGGCGTACGGCGCGGCATACT
Internal bar code:GTTGTCCCAGGATTTCTCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:260
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTAGGGTGAGGTTACGGC
Suggested primer 2:TTCCTGACACCTGGCTCTCT