Insertion junction: LMJ.RY0402.164510_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.164510
Chromosome:chromosome 11
Location:1798327
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGCGCTCGCTCTCATCGCCCGCAGGA
Internal bar code:AGGCAGCGGCGGGTAGGGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:746
LEAP-Seq percent confirming:99.8493
LEAP-Seq n confirming:7951
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTGGATGTTGGTGAAG
Suggested primer 2:TCACGCAACCTCTCTCACAC