Insertion junction: LMJ.RY0402.164594_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.164594
Chromosome:chromosome 6
Location:4067822
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAACACCGCCGTCGTCAACATCACTCTG
Internal bar code:ACGGTGTGGAGAATGGTTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAACCAGACGATACGAA
Suggested primer 2:TCGGCTAAGCTTTCAATCGT