Insertion junction: LMJ.RY0402.164608_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.164608
Chromosome:chromosome 17
Location:1650426
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g708100 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase; Similar to Hypoxanthine-Guanine 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGGTTGCGTTAACTGTGTGGTCCCCA
Internal bar code:TGCGGCGGTAACTTTCCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:52.3066
LEAP-Seq n confirming:1474
LEAP-Seq n nonconfirming:1344
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGAGCAAGGATGGATA
Suggested primer 2:GATACGGAGCTGTCAGAGGC