Insertion junction: LMJ.RY0402.164630_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164630
Chromosome:chromosome 11
Location:576932
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCTGCCGGGCTGCTGATCTCGCAAG
Internal bar code:CGCCCGTAACTCTGCTTCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:81.0924
LEAP-Seq n confirming:1351
LEAP-Seq n nonconfirming:315
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCACTCCACTACCTGC
Suggested primer 2:ACCCATACACGTTCCCTGAG