Insertion junction: LMJ.RY0402.164640_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.164640
Chromosome:chromosome 15
Location:490820
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g636700 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTCTGAGCCGGGCCGACATCACCCGAG
Internal bar code:GACTACCAAGCGAGATGCACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:721
LEAP-Seq percent confirming:99.1047
LEAP-Seq n confirming:1107
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAGTGAGCATGAGGTGG
Suggested primer 2:ATACCGAACCACTCCTGCAC