Insertion junction: LMJ.RY0402.164640_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.164640
Chromosome:chromosome 15
Location:490847
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre15.g636700 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCAACACGAAAGTTATTACAAGCGTCG
Internal bar code:AGGGCGTACACGGAGAAAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:94.9809
LEAP-Seq n confirming:88166
LEAP-Seq n nonconfirming:4659
LEAP-Seq n unique pos:187

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCCCCGCAGTCTACCT
Suggested primer 2:ATACCGAACCACTCCTGCAC