Insertion junction: LMJ.RY0402.164671_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.164671
Chromosome:chromosome 17
Location:4041537
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACACGGTCGATTCTAACAGCTGTGCTT
Internal bar code:ACAAGTCTCCCGGCTAGACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:99.8167
LEAP-Seq n confirming:5989
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCACTTGTTGTTGCTGT
Suggested primer 2:CTCCTCCTTCACCTCCTCCT