Insertion junction: LMJ.RY0402.164730_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164730
Chromosome:chromosome 3
Location:3900108
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g171250 (1 of 1) IPR000104//IPR011989//IPR012677//IPR013083 - Antifreeze protein, type I // Armadillo-like helical // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCACCATCAAGGACCCCACCACAGGAG
Internal bar code:AGGACAGGGCACGGGTTTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:95.9459
LEAP-Seq n confirming:142
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCCTGTTTGTTTCAGCA
Suggested primer 2:ACAGGTTGCAAGCTTCTGGT