Insertion junction: LMJ.RY0402.164842_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.164842
Chromosome:chromosome 3
Location:7916095
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g202300 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCATCTCCATCGCGTCCTGTCCGCCGC
Internal bar code:AATAAACGTTGTGACCGCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTTGTCGAGAACGCTG
Suggested primer 2:TCCACCAGGTAGTGTCCCTC