Insertion junction: LMJ.RY0402.164858_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164858
Chromosome:scaffold 26
Location:39671
Confidence (%):58
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGACTTGCGCGCACGCCTCCTCGGGG
Internal bar code:CATGACCAAGCCGGCCAGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:58.4771
LEAP-Seq n confirming:3118
LEAP-Seq n nonconfirming:2214
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGCGTAATGTTTTCCTT
Suggested primer 2:TTCTCATCGGTCTCCATTCC