Insertion junction: LMJ.RY0402.164906_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164906
Chromosome:chromosome 8
Location:2179383
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g369600 MFT2,MAE2,MFT2 MATE efflux family protein; (1 of 1) IPR000104//IPR002528//IPR029303 - Antifreeze protein, type I // Multi antimicrobial extrusion protein // Polysaccharide biosynthesis protein, C-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGACAGGCACGTCAAAGCACGAACCTTG
Internal bar code:CCGGCCCCCGCTTCGCTCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:94.6892
LEAP-Seq n confirming:4600
LEAP-Seq n nonconfirming:258
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGTTTCTGTGTGTTCTT
Suggested primer 2:CCCTATCCTGCGTCTACCAA