Insertion junction: LMJ.RY0402.164926_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164926
Chromosome:chromosome 9
Location:1310130
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g399000 SDR18 Short-chain dehydrogenase/reductase; (1 of 5) IPR002198//IPR002347//IPR003560//IPR013968 - Short-chain dehydrogenase/reductase SDR // Glucose/ribitol dehydrogenase // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase // Polyketide synthase, ketoreductase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGTGTGTGTGCAATCCAAACTGAGGTG
Internal bar code:AGGACGGAGGCAATTACGCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:99.7389
LEAP-Seq n confirming:2674
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTAAGGAGGCTGTGGGT
Suggested primer 2:GCAGGAGCAAAGGAACAAAG