Insertion junction: LMJ.RY0402.165107_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.165107
Chromosome:chromosome 17
Location:4142659
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g729700 CGL133 (1 of 1) PTHR14374:SF0 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 11; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGAGGGAGGGGACAGGAGGGGGAGGC
Internal bar code:AGGGAGCAGAAAACGCACGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:43
LEAP-Seq percent confirming:45.6311
LEAP-Seq n confirming:235
LEAP-Seq n nonconfirming:280
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACCCCTCTCCATCACT
Suggested primer 2:ATGCACGGCATACTACTCCC