Insertion junction: LMJ.RY0402.165204_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.165204
Chromosome:chromosome 12
Location:7273007
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g557850 (1 of 7) IPR000048//IPR027417 - IQ motif, EF-hand binding site // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGACACGGCAACTGGGTCGCCTACGG
Internal bar code:GACGTTCGACTATCGTAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:61.6995
LEAP-Seq n confirming:1503
LEAP-Seq n nonconfirming:933
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCAGTCACGAACACACGC
Suggested primer 2:CAGCAGCAGCAGCAGTAGAG