Insertion junction: LMJ.RY0402.165336_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.165336
Chromosome:chromosome 12
Location:8514851
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g547800 SNE15 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; NAD dependent epimerase/dehydratase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTAGTCCAAACCCAGTTCTCTCCCATT
Internal bar code:GGCGCGGATCAGTGTGCATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:423
LEAP-Seq percent confirming:99.6669
LEAP-Seq n confirming:1795
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTACCCCGACCACACTCT
Suggested primer 2:CTTTGCGTTCCTGAAATCGT