Insertion junction: LMJ.RY0402.165498_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.165498
Chromosome:chromosome 5
Location:3071541
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g238950 CGLD33 (1 of 5) 2.1.1.34 - tRNA (guanosine(18)-2'-O)-methyltransferase / tRNA (Gm18) methyltransferase; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGACGGCGTCAGGGCCACAGGGGGAGT
Internal bar code:GCATTCGTTATGCGTGCTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:66
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATATCTGCATCATGTCCGC
Suggested primer 2:CACCACGAACTTGTACCCCT