Insertion junction: LMJ.RY0402.165511_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.165511
Chromosome:chromosome 9
Location:6941134
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGGGAAGCGATAGTGGTGCTGCAGGC
Internal bar code:CCATGGATTAAGCGGGACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAGGAACACAACCTATT
Suggested primer 2:CGTGACGTTCCATTTGTGTC