Insertion junction: LMJ.RY0402.165511_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.165511
Chromosome:chromosome 9
Location:6941821
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGAACACGCAGCGGCTGTTTTAGACTT
Internal bar code:TCTGCGAAAACCTTTACAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:0
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:186
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAACTCGTGTTTCGCAC
Suggested primer 2:TGCAGTGACGAGTGACATGA