Insertion junction: LMJ.RY0402.165568_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.165568
Chromosome:chromosome 11
Location:2062065
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGCGAGCCACCACGGGCTTTGGCGTGA
Internal bar code:CTACTCAGCGGAGCCAAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:99.4725
LEAP-Seq n confirming:4526
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGCTCAGGCCATTACT
Suggested primer 2:GATGGGTGGATAAGTGGGTG