Insertion junction: LMJ.RY0402.165606_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.165606
Chromosome:chromosome 8
Location:4860009
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g384750 AMYA3,AMA3 Alpha-amylase 3; (1 of 3) K01176 - alpha-amylase (E3.2.1.1, amyA, malS) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGACCAGCAGACGATGTTGTCGTCAG
Internal bar code:GATGATCGGGCCAACGAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:99.7657
LEAP-Seq n confirming:4684
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAAACAAAGCGCAAAGA
Suggested primer 2:TGAACGTGTGCCTCTCTGTC