Insertion junction: LMJ.RY0402.165661_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.165661
Chromosome:chromosome 14
Location:2535888
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g625450 VTE3 MPBQ/MSBQ methyltransferase, chloroplastic; (1 of 1) 2.1.1.295 - 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase / MPBQ/MSBQ methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGTACATGTAGATGGGCACTGCGGGG
Internal bar code:TGTCTTACTCTTGTCAAGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:98.8682
LEAP-Seq n confirming:2708
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTGGTGGGAGTTCTGT
Suggested primer 2:CGGGCAATTAAATAGAGGCA