Insertion junction: LMJ.RY0402.165718_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.165718
Chromosome:chromosome 9
Location:5687448
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGGTGTCCCCAACAGCGCCGTTGCAG
Internal bar code:GCGGAGACTTGAGTATAGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:99.4371
LEAP-Seq n confirming:530
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGAAAAAGGCAGAATCC
Suggested primer 2:GGAACCGCTAGTGTATCCCA