Insertion junction: LMJ.RY0402.165762_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.165762
Chromosome:chromosome 1
Location:2456700
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGAAGAACCCGCTGCAGGCTGGCAGAG
Internal bar code:GCCCTTCAAAGTTCGGATCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:921
LEAP-Seq percent confirming:99.5621
LEAP-Seq n confirming:2956
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGAGAGGTGAGCGTGT
Suggested primer 2:CAGTACCACCCCTCGAAAAA