Insertion junction: LMJ.RY0402.165889_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.165889
Chromosome:chromosome 1
Location:3762572
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g024251 (1 of 1) PF00270//PF00271//PF04408 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCACGCGTGCGCGTCAGCTGCTGCGTA
Internal bar code:CCCTATTCGTAACATGGATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:99.5314
LEAP-Seq n confirming:2761
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGATTTGTGACACTGTTG
Suggested primer 2:CGAAGCATGATGTCTGCACT