Insertion junction: LMJ.RY0402.165929_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.165929
Chromosome:chromosome 3
Location:7435769
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCAACGCTGCCCTCCCGCCGCCTGAC
Internal bar code:GTGACGTGCCTCGGCTGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:86.1538
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTCTTGCCAGAGGTTGC
Suggested primer 2:ATGGGGCTAGGAGTCAAGGT