Insertion junction: LMJ.RY0402.165960_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.165960
Chromosome:chromosome 4
Location:1878674
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATAAGGTCCTGCCCTTGGCCCTTGGCCC
Internal bar code:CAGTAAGTCGGCGGTTTCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:99.5276
LEAP-Seq n confirming:12431
LEAP-Seq n nonconfirming:59
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCGGTCCTAAATGTGG
Suggested primer 2:ATGGGACAGTGGTAAGGCAG