Insertion junction: LMJ.RY0402.165980_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.165980
Chromosome:chromosome 7
Location:3792725
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g338400 (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAACTCGGAGCCAGGACTTCTCCTCCC
Internal bar code:ATTGTACTTGACACACTCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:52
LEAP-Seq percent confirming:99.3151
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGGTAGAGTCAACGGC
Suggested primer 2:TGTCTCTTCCTCCAGCCTGT