Insertion junction: LMJ.RY0402.166017_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.166017
Chromosome:chromosome 12
Location:2149194
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g508750 LHCA2 Light-harvesting protein of photosystem I; (1 of 24) IPR001344//IPR022796//IPR023329 - Chlorophyll A-B binding protein, plant // Chlorophyll A-B binding protein // Chlorophyll a/b binding protein domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGCGAGTGCTCACACCGTACGGTAGA
Internal bar code:GCGGCTAGGCTGCGACGGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:97.3347
LEAP-Seq n confirming:5770
LEAP-Seq n nonconfirming:158
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACAGTCTACACCTCGT
Suggested primer 2:TGTGATCAGCTTCCAGCAAC