Insertion junction: LMJ.RY0402.166488_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.166488
Chromosome:chromosome 9
Location:3648072
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGTGGAGCGTGTCCGGAAGCGCGTAG
Internal bar code:GTGGATGCCCAGGCAGAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:489
LEAP-Seq percent confirming:99.1184
LEAP-Seq n confirming:787
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGGAGAAGGACGTGGT
Suggested primer 2:TTCATCCTGTCGTTCTGCTG