Insertion junction: LMJ.RY0402.166488_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.166488
Chromosome:chromosome 9
Location:3648080
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCAAACAACCGCTGCACTGACAACAAGT
Internal bar code:CAAGCGGCCGCGGTGTATAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:98.6118
LEAP-Seq n confirming:2131
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGGAGAAGGACGTGGT
Suggested primer 2:TTCATCCTGTCGTTCTGCTG