Insertion junction: LMJ.RY0402.166521_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.166521
Chromosome:chromosome 3
Location:3566374
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g168150 (1 of 2) PF00069//PF12796 - Protein kinase domain (Pkinase) // Ankyrin repeats (3 copies) (Ank_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGCACTGCAATAAGAAGGGCCCCAC
Internal bar code:CCCGCTTGCGTTTGTTTTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:337
LEAP-Seq percent confirming:99.5845
LEAP-Seq n confirming:8869
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACTGGGTATGCGTAACA
Suggested primer 2:CAGATTCATTCGGTACGGCT