Insertion junction: LMJ.RY0402.166561_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.166561
Chromosome:chromosome 1
Location:3664822
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g023600 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCCTTAACGGACTTTTACACTGGTA
Internal bar code:GGCGATTTTCACAGTAGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCCCATCACTAGCCCGA
Suggested primer 2:CACATACTTCCACACGTGCC