Insertion junction: LMJ.RY0402.166647_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.166647
Chromosome:chromosome 9
Location:7905866
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g417100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCGCACAACCATGGAACGAGGAGAATG
Internal bar code:TTTGCAGCGCTTCGTAAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:122
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATAGCAGTGTGGTCAGA
Suggested primer 2:CGAACAATGAACCATGAACG