Insertion junction: LMJ.RY0402.166714_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.166714
Chromosome:chromosome 9
Location:5561605
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g400701 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACTTCGCACGAACCACCATGTTCTTCC
Internal bar code:TCAGCGGCATCAAGGCAGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:97.1719
LEAP-Seq n confirming:6219
LEAP-Seq n nonconfirming:181
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTAATTCGGGTGCTGT
Suggested primer 2:CGAAGCTTTGGAAGTTCTGG