Insertion junction: LMJ.RY0402.166827_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.166827
Chromosome:chromosome 17
Location:3306107
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGGGTTGCGGACTGTGTGTGGCAGC
Internal bar code:TCCTAAACCGTTATTCCCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:99.537
LEAP-Seq n confirming:215
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGATCGAGGTGTTCTGT
Suggested primer 2:CTGGTGACAACACACCCTTG