Insertion junction: LMJ.RY0402.166836_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.166836
Chromosome:chromosome 9
Location:759307
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g402350 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGCCCAGCGAGAACGTTTTAGGGCGG
Internal bar code:CGCCTGCGTTCTACGCTTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1148
LEAP-Seq percent confirming:99.6701
LEAP-Seq n confirming:3625
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTATGTTACTGCCGGTCT
Suggested primer 2:AGTGCGGGATCCACGTATAG