Insertion junction: LMJ.RY0402.166870_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.166870
Chromosome:chromosome 9
Location:4828323
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397475 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGAATCGTCCTTTGAAAGCATCTTCGG
Internal bar code:GATGGGCAAATTGGGTGCAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1103
LEAP-Seq percent confirming:97.079
LEAP-Seq n confirming:565
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTCGGCTCCTAAACAA
Suggested primer 2:ATGGGACAGTGGTAAGGCAG