Insertion junction: LMJ.RY0402.167301_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.167301
Chromosome:chromosome 4
Location:2194655
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g219925 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGATGGTACGCTTAGGGCGGCGGAGG
Internal bar code:TCGCAGAGGGTAAGGCGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:651
LEAP-Seq percent confirming:47.8811
LEAP-Seq n confirming:870
LEAP-Seq n nonconfirming:947
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTATGCTTTTTGCGTGT
Suggested primer 2:GCTTTAAGGAACGAAATGCG