Insertion junction: LMJ.RY0402.167356_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.167356
Chromosome:chromosome 16
Location:1131056
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTAGAGTGGAAGTTAGAGTCAGCACG
Internal bar code:ACTCGTTCGCTTTTGTTCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:99.1292
LEAP-Seq n confirming:4098
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCACTGAGAAGTGGAG
Suggested primer 2:GTAAAGGCGTGATCGGTGTT