Insertion junction: LMJ.RY0402.167361_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.167361
Chromosome:chromosome 7
Location:2953673
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATTGCAGGCGCCCACCTGCAGTCGTTG
Internal bar code:GGGCGGCCATCGACGGACCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:282
LEAP-Seq percent confirming:41.9515
LEAP-Seq n confirming:13771
LEAP-Seq n nonconfirming:19055
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGTCAACGTGTCCTTC
Suggested primer 2:CCAGGTCAAGCTCGTCTTTC