Insertion junction: LMJ.RY0402.167478_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.167478
Chromosome:chromosome 4
Location:1243143
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGGTGGGCCTCCGGACATGGACACA
Internal bar code:TTTGGTGGATCATTGCTCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:99.3871
LEAP-Seq n confirming:20432
LEAP-Seq n nonconfirming:126
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGGTGACTGCGAAACTG
Suggested primer 2:GTATCCCCTCTAGCCCTTGC