Insertion junction: LMJ.RY0402.167486_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.167486
Chromosome:chromosome 4
Location:2385313
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g221050 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGTGTCGTGGCGTGGAGCGCCGGC
Internal bar code:GGACTAAATCACATCTTAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:99.5326
LEAP-Seq n confirming:4259
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTGTGTACCGTTTGC
Suggested primer 2:TACAAGCGCAATCGTGAAAG