Insertion junction: LMJ.RY0402.167534_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.167534
Chromosome:chromosome 2
Location:6061326
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g112750 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAATCAACAAGTTCCACATCCTTGCCGC
Internal bar code:GATGTTTGCCCTCTGCCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:99.5356
LEAP-Seq n confirming:3215
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGAACAAAAGGAGTTGC
Suggested primer 2:TGGCAGAGAACAGCTCCAC