Insertion junction: LMJ.RY0402.167542_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.167542
Chromosome:chromosome 16
Location:1104403
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACGATTGATACACCCACGAGGCCTGCC
Internal bar code:GAGCTCGCTGACTTGCCCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1089
LEAP-Seq percent confirming:98.1346
LEAP-Seq n confirming:19833
LEAP-Seq n nonconfirming:377
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CATACATCGCCTCTGAAGCA
Suggested primer 2:ATGTGTACTGCGAGTGCCTG